Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
927
candidate regulatory elements
target gene predictions
508
chromatin state
197
accessible chromatin
112
eQTL
gene expression
87
histone modifications
74
Fine-mapped variants
48
variant allelic effects
34
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
912
September, 2022
602
February, 2021
73
March, 2020
63
June, 2020
59
May, 2020
53
January, 2022
44
January, 2020
37
August, 2021
26
February, 2020
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
May, 2021
Available data
1318
bed bed3+
483
bed bed9
120
bigWig
104
tsv
31
bigBed bed9
1
bam
Organism
2002
Homo sapiens
Biosample type
2004
tissue
1877
cell line
1586
primary cell
322
in vitro differentiated cells
1
stem cell
Organ
284
brain
232
kidney
231
musculature of body
184
limb
172
intestine
158
heart
136
lung
99
large intestine
86
pancreas
80
stomach
74
extraembryonic component
67
connective tissue
66
blood vessel
66
vasculature
64
eye
60
adipose tissue
59
small intestine
54
epithelium
51
ureter
45
liver
45
placenta
44
adrenal gland
35
artery
34
thymus
28
gonad
27
embryo
27
spinal cord
26
esophagus
25
spleen
20
nerve
skin of body
15
bone element
15
skeleton
14
ovary
14
testis
14
thyroid gland
13
lymphoid tissue
12
prostate gland
9
breast
9
uterus
8
mouth
7
tongue
7
vagina
6
urinary bladder
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
1999
AMP
5
ITG
Genome assembly (visualization)
1923
hg19
728
GRCh38
3
hg18
annotation_type!
gene expression
target gene predictions
organ_slims!
skin of body
BIOSAMPLE
TYPE
2004 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
21
5
1
2
1
stomach
40
19
3
1
1
kidney
29
16
10
1
2
1
1
brain
29
18
2
2
3
1
1
muscle of arm
33
16
1
1
+ See 225 more…
See all biosamples
Download