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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
Organism
170
Homo sapiens
Biosample type
130
tissue
34
cell line
6
primary cell
Organ
706
epithelium
449
kidney
429
brain
413
connective tissue
363
musculature of body
309
lung
283
intestine
237
limb
233
heart
230
vasculature
223
pancreas
217
bodily fluid
206
blood
205
embryo
199
skin of body
176
blood vessel
170
large intestine
145
extraembryonic component
133
liver
116
stomach
108
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
73
adipose tissue
72
placenta
71
adrenal gland
64
artery
64
penis
64
ureter
62
lymph node
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
22
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
164
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
41
GRCh38
annotation_type!
gene expression
variant to gene
month_released!
January, 2022
BIOSAMPLE
TYPE
170 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 4 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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