Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
candidate regulatory elements
15
target gene predictions
13
chromatin state
8
binding sites
7
histone modifications
5
accessible chromatin
1
eQTL
gene expression
1
variant allelic effects
Date released
39
September, 2022
29
February, 2021
5
June, 2020
2
May, 2021
1
February, 2024
1
January, 2022
Available data
63
bed bed3+
13
bed bed9
Organism
77
Homo sapiens
Biosample type
53
cell line
14
tissue
10
primary cell
Organ
475
epithelium
447
brain
391
kidney
353
musculature of body
344
connective tissue
298
lung
267
intestine
239
limb
224
heart
217
bodily fluid
207
vasculature
206
blood
203
embryo
192
skin of body
186
pancreas
166
blood vessel
166
large intestine
143
extraembryonic component
126
liver
108
stomach
104
eye
82
bone element
81
mammary gland
80
small intestine
79
uterus
77
prostate gland
76
adipose tissue
71
placenta
65
artery
64
penis
64
ureter
62
adrenal gland
62
lymph node
48
thymus
46
gonad
42
spinal cord
39
esophagus
33
spleen
25
testis
lymphoid tissue
23
nerve
22
vein
20
ovary
20
thyroid gland
18
mouth
18
skeleton
13
bronchus
12
breast
12
lymphatic vessel
12
pituitary gland
10
bone marrow
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
77
AMP
Genome assembly (visualization)
76
hg19
14
GRCh38
annotation_type!
gene expression
files.file_type!
bam
organ_slims!
lymphoid tissue
BIOSAMPLE
TYPE
77 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
variant allelic effects
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 5 more…
tissue
prostate gland
4
2
2
2
2
1
1
primary cell
epithelial cell of prostate
4
3
2
luminal epithelial cell of prostatic duct
1
See all biosamples
Download