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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • 753chromatin state
  • 750accessible chromatin
  • gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1969September, 2022
  • 1110February, 2021
  • 333November, 2021
  • 244May, 2021
  • 153May, 2020
  • 137June, 2020
  • 136February, 2024
  • 115September, 2023
  • 113March, 2020
  • 96January, 2022
  • 78August, 2021
  • 71January, 2020
  • 56January, 2021
  • 48March, 2023
  • 44November, 2022
  • 42May, 2022
  • 40May, 2024
  • 32March, 2025
  • 31February, 2023
  • 31October, 2022
  • 30August, 2017
  • 26February, 2020
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3949bed bed3+
  • 2929tsv
  • 690bed bed9
  • 533bigWig
  • 40bigBed bed9
  • 27bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7600Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1962EpiMap
  • 722ENCODE
  • 542ChIP-Atlas
  • 419AMP
  • 405T2DKP
  • 372DGA
  • 310T1D
  • 174BLUEPRINT
  • 118 T2DKP
  • 110KPMP
  • 101T2D
  • 96GTEx
  • 91eQTLCatalogue
  • 88CMDGA
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 5207tissue
  • cell line
  • 2039primary cell
  • 396in vitro differentiated cells
  • 4stem cell
Organ
  • 2865vasculature
  • 2816blood vessel
  • 2655vein
  • 2653bodily fluid
  • 2652blood
  • 670epithelium
  • 412kidney
  • 398connective tissue
  • 371brain
  • 351musculature of body
  • 252intestine
  • 232limb
  • 228heart
  • 214lung
  • 203pancreas
  • 143extraembryonic component
  • 138large intestine
  • 132skin of body
  • 117stomach
  • 110liver
  • 98eye
  • 86embryo
  • 84small intestine
  • 81adipose tissue
  • 72adrenal gland
  • 70placenta
  • 67artery
  • 64ureter
  • 51mammary gland
  • 49penis
  • 49thymus
  • 43esophagus
  • 41gonad
  • 39spinal cord
  • 33spleen
  • 32bone element
  • 24prostate gland
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 19lymphatic vessel
  • 18skeleton
  • 18testis
  • 17lymphoid tissue
  • 16bronchus
  • 16uterus
  • 14mouth
  • 13bone marrow
  • 12breast
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 2pituitary gland
Project
  • 7117AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 4680hg19
  • 1535GRCh38
  • 3hg18
annotation_type!
  • gene expression
biosample_type!
  • cell line
BIOSAMPLE
TYPE

7648 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart3720215112
stomach402119311
kidney291416102111
brain29161823211
primary cell
monocyte2188641121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell751430
B cell171086
endothelial cell371511222
in vitro differentiated cells
hematopoietic multipotent progenitor cell191010111
neural progenitor cell5541015
adipocyte466411
embryonic stem cell15611
mesenchymal stem cell332111
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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