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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 888histone modifications
  • 839target gene predictions
  • 781binding sites
  • 772candidate regulatory elements
  • 716accessible chromatin
  • gene expression
  • 433chromatin state
  • 162differential activity
  • 92variant allelic effects
  • 60eQTL
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2Fine-mapped variants
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1800February, 2021
  • 1134September, 2022
  • 333November, 2021
  • 278February, 2024
  • 270May, 2021
  • 226June, 2020
  • 115September, 2023
  • 101October, 2022
  • 95May, 2020
  • 56January, 2021
  • 51March, 2023
  • 50January, 2022
  • 47May, 2022
  • 42August, 2021
  • 40May, 2024
  • 27January, 2020
  • 27November, 2022
  • 19April, 2020
  • 16August, 2017
  • 15March, 2020
  • 9October, 2019
  • 6February, 2023
  • 6March, 2025
  • 4November, 2019
  • 2January, 2025
  • 2November, 2020
  • 1June, 2021
Available data
  • 4157bed bed3+
  • 417bigWig
  • 383bed bed9
  • 162tsv
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 9bigBed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 4726Homo sapiens
Collection Tags
  • 1661ChIP-Atlas
  • 1122EpiMap
  • 458ENCODE
  • 390AMP
  • 364T2DKP
  • 290DGA
  • 269T1D
  • 180BLUEPRINT
  • 1744DN
  • 110KPMP
  • 86 T2DKP
  • 55T2D
  • 50CMDGA
  • 45eQTLCatalogue
  • 42HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 6STARNET
Biosample type
  • tissue
  • 2331cell line
  • 2039primary cell
  • 396in vitro differentiated cells
  • 4stem cell
Organ
  • 646epithelium
  • 342connective tissue
  • 214bodily fluid
  • 204blood
  • 179skin of body
  • 170embryo
  • 159kidney
  • 154vasculature
  • 130lung
  • 128pancreas
  • 116brain
  • 100blood vessel
  • 85mammary gland
  • 78liver
  • 70uterus
  • 67bone element
  • 63musculature of body
  • 63prostate gland
  • 62lymph node
  • 62penis
  • 57intestine
  • 48extraembryonic component
  • 40large intestine
  • 39eye
  • 37heart
  • 27artery
  • 22vein
  • 21lymphatic vessel
  • 16bronchus
  • 13bone marrow
  • 13placenta
  • 11adrenal gland
  • 11gonad
  • 11stomach
  • 10esophagus
  • 10pituitary gland
  • 8limb
  • 8mouth
  • 8testis
  • 7spinal cord
  • 6lymphoid tissue
  • 5trachea
  • 4adipose tissue
  • 4nose
  • 4small intestine
  • 3thyroid gland
  • 2ovary
  • 1thymus
Project
  • 4237AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
Genome assembly (visualization)
  • 4532hg19
  • 1166GRCh38
  • 1hg18
annotation_type!
  • gene expression
biosample_type!
  • tissue
BIOSAMPLE
TYPE

4772 results

search-icontable-tab-icon
Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
Fine-mapped variants
other
representative DNase hypersensitivity sites
cell line
HeLa-S355153
A549119221118
H1-hESC1392111
K5621232717
MCF-7263915
primary cell
monocyte8621184211
common myeloid progenitor, CD34-positive142713
CD8-positive, alpha-beta T cell305741
B cell101768
endothelial cell172315212
in vitro differentiated cells
hematopoietic multipotent progenitor cell110119110
neural progenitor cell1555104
adipocyte161446
embryonic stem cell11165
mesenchymal stem cell131312
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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