Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1218
candidate regulatory elements
841
target gene predictions
681
chromatin state
664
binding sites
664
histone modifications
350
accessible chromatin
124
eQTL
gene expression
74
Fine-mapped variants
52
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1869
February, 2021
1856
September, 2022
205
June, 2020
143
February, 2024
105
March, 2020
81
May, 2021
68
October, 2022
65
January, 2022
62
May, 2020
46
January, 2020
38
August, 2021
27
February, 2023
26
February, 2020
24
August, 2017
17
November, 2022
15
March, 2023
11
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
1
August, 2020
1
August, 2022
Available data
3819
bed bed3+
644
bed bed9
124
bigWig
105
tsv
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4693
Homo sapiens
Biosample type
2490
tissue
2205
cell line
1970
primary cell
368
in vitro differentiated cells
3
stem cell
Organ
408
brain
329
kidney
318
musculature of body
276
lung
263
intestine
238
limb
208
bodily fluid
207
heart
197
blood
166
large intestine
embryo
127
pancreas
110
connective tissue
106
stomach
101
extraembryonic component
94
epithelium
93
skin of body
89
vasculature
84
blood vessel
84
liver
80
small intestine
79
eye
76
uterus
75
adipose tissue
71
bone element
67
prostate gland
64
ureter
63
placenta
62
lymph node
61
adrenal gland
48
thymus
44
gonad
43
artery
38
mammary gland
38
spinal cord
33
esophagus
33
spleen
testis
23
lymphoid tissue
23
nerve
20
ovary
19
thyroid gland
18
skeleton
17
penis
14
mouth
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
2
lymphatic vessel
2
vein
Project
4681
AMP
9
community
5
ITG
Genome assembly (visualization)
4591
hg19
1026
GRCh38
4
hg18
annotation_type!
gene expression
organ_slims!
embryo
testis
BIOSAMPLE
TYPE
4695 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
1
1
5
2
stomach
40
21
19
1
3
1
kidney
29
14
16
1
2
10
1
1
brain
29
16
18
1
3
2
2
1
lung
33
17
16
1
+ See 228 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
breast cancer cell
9
11
+ See 741 more…
See all biosamples
Download