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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
482
accessible chromatin
gene expression
367
target gene predictions
359
candidate regulatory elements
210
histone modifications
191
chromatin state
152
differential activity
98
binding sites
80
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
478
September, 2022
333
November, 2021
328
February, 2021
187
May, 2021
110
September, 2023
105
February, 2024
84
May, 2020
56
January, 2021
52
June, 2020
42
March, 2023
41
May, 2024
40
May, 2022
37
January, 2022
30
October, 2022
21
January, 2020
19
April, 2020
17
August, 2021
9
November, 2022
7
October, 2019
5
August, 2017
4
February, 2023
2
November, 2020
1
June, 2021
Available data
1616
bed bed3+
400
bigWig
159
bed bed9
154
tsv
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1963
Homo sapiens
Biosample type
2507
tissue
2326
cell line
2008
primary cell
396
in vitro differentiated cells
4
stem cell
Organ
594
epithelium
260
connective tissue
142
vasculature
120
kidney
102
pancreas
100
skin of body
95
blood vessel
46
liver
46
mammary gland
44
musculature of body
41
penis
40
extraembryonic component
35
brain
34
lung
29
heart
24
artery
23
eye
23
intestine
22
embryo
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
spinal cord
3
thyroid gland
2
ovary
1
limb
1
testis
1
thymus
Project
1485
AMP
333
ENCODE
110
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1807
hg19
731
GRCh38
annotation_type!
gene expression
organ_slims!
spinal cord
vein
BIOSAMPLE
TYPE
2008 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
30
1
B cell
6
10
17
8
endothelial cell
15
7
3
1
2
2
1
2
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