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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1236accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2511September, 2022
  • 2413February, 2021
  • 1984July, 2026
  • 333November, 2021
  • 320May, 2026
  • 299February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2March, 2026
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 8068bed bed3+
  • 2911tsv
  • 869bed bed9
  • 537bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • bed bed3
  • 12bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
  • 2txt
Organism
  • 12218Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 938ENCODE
  • 429DGA
  • 424AMP
  • 406T2DKP
  • 393HDMA
  • 327T1D
  • 320pyxis
  • 181BLUEPRINT
  • 1744DN
  • 133CATlas
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 54HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5839tissue
  • 3443primary cell
  • 2538cell line
  • 440in vitro differentiated cells
  • 4stem cell
Organ
  • 3364blood
  • 2865vasculature
  • 2852bodily fluid
  • 2835blood vessel
  • 2658vein
  • 884brain
  • 698epithelium
  • 554kidney
  • 468connective tissue
  • 466heart
  • 439lung
  • 371musculature of body
  • 355intestine
  • 294skin of body
  • 271pancreas
  • 239limb
  • 224large intestine
  • 216liver
  • 205embryo
  • 174extraembryonic component
  • 160eye
  • 138stomach
  • 129adipose tissue
  • 111muscle organ
  • 104mammary gland
  • 102bone element
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 91uterus
  • 86prostate gland
  • 80artery
  • 73ureter
  • 64penis
  • 62gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 48spinal cord
  • 46esophagus
  • 46thyroid gland
  • 31ovary
  • 30testis
  • 24skeleton
  • 23lymphoid tissue
  • 23nerve
  • 20mouth
  • 18lymphatic vessel
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 12pituitary gland
  • 12urinary bladder
  • 11tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 11724AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 15community
  • 5ITG
Genome assembly (visualization)
  • 6990hg19
  • 3884GRCh38
  • 4hg18
annotation_type!
  • gene expression
files.file_type!
  • bed bed3
BIOSAMPLE
TYPE

12266 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart38375121112
stomach424031191
kidney282910216111
brain30292318121
primary cell
monocyte21886144121
fibroblast2834011026
endothelial cell173231225223
CD8-positive, alpha-beta T cell2774301
T-cell644
cell line
A549332111182
HeLa-S359531
K5623071172
H1-hESC3911112
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911101
neural progenitor cell6510154
adipocyte744161
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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