Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
15
accessible chromatin
9
binding sites
4
histone modifications
1
chromatin state
1
eQTL
gene expression
1
variant allelic effects
Date released
140
September, 2022
70
February, 2021
9
November, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
April, 2020
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
Available data
239
bed bed3+
bed bed9
9
bigWig
Organism
240
Homo sapiens
Biosample type
137
tissue
73
cell line
30
primary cell
Organ
656
epithelium
381
brain
378
connective tissue
373
kidney
293
musculature of body
240
lung
231
intestine
216
pancreas
201
vasculature
192
bodily fluid
190
heart
189
limb
183
blood
178
embryo
168
skin of body
152
blood vessel
139
large intestine
120
liver
113
extraembryonic component
99
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
68
adipose tissue
65
small intestine
64
prostate gland
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
40
gonad
38
thymus
36
esophagus
34
spinal cord
27
spleen
21
testis
19
lymphatic vessel
19
nerve
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
skeleton
14
bronchus
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
Project
228
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
239
hg19
10
GRCh38
annotation_type!
gene expression
files.file_type!
bed bed9
organ_slims!
artery
BIOSAMPLE
TYPE
240 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
variant allelic effects
tissue
lung
33
17
1
left lung
26
13
right lung
22
11
1
upper lobe of left lung
7
3
1
1
1
cell line
A549
21
19
1
2
1
IMR-90
2
2
1
2
1
PC-9
2
2
1
1
1
WI38
5
1
NCI-H226 cell
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
2
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
type I pneumocyte
1
3
endothelial cell of artery
1
+ See 1 more…
See all biosamples
Download