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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 904chromatin state
  • 817binding sites
  • gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 2413February, 2021
  • 333November, 2021
  • 304February, 2024
  • 294May, 2021
  • 289June, 2020
  • 152May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 66January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 32March, 2025
  • 31August, 2017
  • 26February, 2020
  • 19April, 2020
  • 13November, 2019
  • 9October, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 6084bed bed3+
  • 2930tsv
  • 869bed bed9
  • 537bigWig
  • bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9891Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 938ENCODE
  • 424DGA
  • 423AMP
  • 405T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5176tissue
  • 2331cell line
  • 2035primary cell
  • 391in vitro differentiated cells
  • 4stem cell
Organ
  • 2867vasculature
  • 2858bodily fluid
  • 2847blood
  • 2813blood vessel
  • 2655vein
  • 703epithelium
  • 448kidney
  • 442brain
  • 427connective tissue
  • 365musculature of body
  • 310lung
  • 286intestine
  • 235limb
  • 227pancreas
  • 226heart
  • 205embryo
  • 202skin of body
  • 172large intestine
  • 146extraembryonic component
  • 137liver
  • 117stomach
  • 108eye
  • 87mammary gland
  • 85bone element
  • 84small intestine
  • 83adipose tissue
  • 81uterus
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 68artery
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 48gonad
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 22nerve
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
Project
  • 9399AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6950hg19
  • 1869GRCh38
  • 4hg18
annotation_type!
  • gene expression
files.file_type!
  • bigBed bed9
BIOSAMPLE
TYPE

9939 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
chromatin state
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart3720151912
stomach402113191
kidney291421014111
brain29163216121
cell line
HeLa-S355531
A549211911182
H1-hESC1391112
K5627231172
MCF-7962153
primary cell
monocyte2861814121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753041
B cell171068
endothelial cell371152122
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011101
neural progenitor cell5515104
adipocyte461461
mesenchymal stem cell331121
embryonic stem cell1161
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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