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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1355target gene predictions
  • 944chromatin state
  • 902accessible chromatin
  • 872candidate regulatory elements
  • gene expression
  • 186eQTL
  • 172differential activity
  • 140variant allelic effects
  • 137histone modifications
  • 99binding sites
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2639February, 2025
  • 2511September, 2022
  • February, 2021
  • 333November, 2021
  • 304February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 32March, 2025
  • 26February, 2020
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3672bed bed3+
  • 2929tsv
  • 869bed bed9
  • 523bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7518Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 424AMP
  • 413DGA
  • 405T2DKP
  • 327T1D
  • 290ChIP-Atlas
  • 181BLUEPRINT
  • 1744DN
  • 124 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 100ENCODE
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4594tissue
  • 1705primary cell
  • 1028cell line
  • 233in vitro differentiated cells
  • 4stem cell
Organ
  • 2830vasculature
  • 2787blood vessel
  • 2784bodily fluid
  • 2777blood
  • 2650vein
  • 594epithelium
  • 355kidney
  • 342connective tissue
  • 339brain
  • 276musculature of body
  • 240lung
  • 215intestine
  • 204pancreas
  • 190heart
  • 181limb
  • 152embryo
  • 134skin of body
  • 126large intestine
  • 116liver
  • 113extraembryonic component
  • 91eye
  • 88stomach
  • 71uterus
  • 69adipose tissue
  • 66small intestine
  • 59mammary gland
  • 58adrenal gland
  • 56artery
  • 55placenta
  • 53bone element
  • 48prostate gland
  • 46ureter
  • 38thymus
  • 36gonad
  • 36penis
  • 35lymph node
  • 33esophagus
  • 33spinal cord
  • 23spleen
  • 20nerve
  • 18lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 17testis
  • 16lymphatic vessel
  • 14mouth
  • 11bronchus
  • 11pituitary gland
  • 9breast
  • 9skeleton
  • 8bone marrow
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 4nose
  • 1trachea
Project
  • 7026AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4578hg19
  • 1889GRCh38
  • 4hg18
annotation_type!
  • gene expression
month_released!
  • February, 2021
BIOSAMPLE
TYPE

7566 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
chromatin state
accessible chromatin
candidate regulatory elements
eQTL
differential activity
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood2635
heart20215192
stomach21193191
kidney1416101411
brain161821621
primary cell
monocyte218484121
CD8-positive, alpha-beta T cell51430
common myeloid progenitor, CD34-positive141313
B cell108612
fibroblast4163261
cell line
HeLa-S355331
A54919181181
H1-hESC391111
K562237161
HFFc619
in vitro differentiated cells
neural progenitor cell5410414
hematopoietic multipotent progenitor cell1010110
adipocyte6642
embryonic stem cell156
mesenchymal stem cell3212
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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