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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
57
target gene predictions
49
chromatin state
14
accessible chromatin
6
binding sites
5
histone modifications
3
variant allelic effects
2
eQTL
gene expression
Date released
137
September, 2022
64
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2020
3
May, 2020
2
January, 2022
1
March, 2020
1
October, 2022
Available data
188
bed bed3+
46
bed bed9
6
bigWig
Organism
236
Homo sapiens
Biosample type
196
tissue
34
cell line
6
primary cell
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
230
AMP
6
ENCODE
Genome assembly (visualization)
234
hg19
59
GRCh38
annotation_type!
gene expression
month_released!
January, 2018
organ_slims!
skeleton
BIOSAMPLE
TYPE
236 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
tissue
large intestine
27
14
13
1
1
renal pelvis
19
9
9
2
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
left renal pelvis
6
2
2
1
1
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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