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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
gene expression
21
accessible chromatin
20
target gene predictions
16
chromatin state
12
binding sites
12
histone modifications
7
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
19
February, 2021
17
February, 2024
10
August, 2021
6
March, 2020
4
June, 2020
4
November, 2021
3
August, 2017
3
March, 2023
3
May, 2021
2
May, 2020
2
May, 2022
1
February, 2020
1
January, 2020
January, 2022
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
94
bed bed3+
13
bed bed9
12
bigWig
8
tsv
1
bam
1
bigBed bed9
Organism
122
Homo sapiens
Biosample type
55
tissue
37
primary cell
26
cell line
4
in vitro differentiated cells
Organ
706
epithelium
449
kidney
429
brain
connective tissue
363
musculature of body
309
lung
283
intestine
237
limb
233
heart
230
vasculature
225
pancreas
217
bodily fluid
206
blood
205
embryo
199
skin of body
176
blood vessel
170
large intestine
145
extraembryonic component
133
liver
116
stomach
108
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
73
adipose tissue
72
placenta
71
adrenal gland
64
artery
64
penis
64
ureter
62
lymph node
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
22
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
118
AMP
4
ENCODE
Genome assembly (visualization)
116
hg19
48
GRCh38
2
hg18
annotation_type!
gene expression
month_released!
January, 2022
organ_slims!
connective tissue
BIOSAMPLE
TYPE
122 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
4
10
9
1
2
6
1
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
2
8
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
6
pancreatic endothelial cell
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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