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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
6
binding sites
5
histone modifications
3
accessible chromatin
2
eQTL
gene expression
Date released
98
September, 2022
46
February, 2021
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
1
October, 2022
Available data
130
bed bed3+
33
bed bed9
3
bigWig
Organism
165
Homo sapiens
Biosample type
129
tissue
30
cell line
6
primary cell
Organ
671
epithelium
435
kidney
426
brain
391
connective tissue
358
musculature of body
304
lung
276
intestine
233
limb
229
heart
225
pancreas
224
vasculature
205
bodily fluid
195
embryo
194
blood
194
skin of body
175
blood vessel
165
large intestine
140
extraembryonic component
127
liver
114
stomach
102
eye
83
mammary gland
83
small intestine
80
bone element
79
uterus
75
adipose tissue
72
prostate gland
71
adrenal gland
71
placenta
64
artery
63
ureter
61
penis
54
lymph node
48
thymus
gonad
41
esophagus
40
spinal cord
32
spleen
23
testis
22
nerve
21
lymphoid tissue
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
lymphatic vessel
17
mouth
15
bronchus
13
bone marrow
pituitary gland
11
breast
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
Project
159
AMP
6
ENCODE
Genome assembly (visualization)
163
hg19
43
GRCh38
annotation_type!
gene expression
month_released!
June, 2020
organ_slims!
gonad
pituitary gland
BIOSAMPLE
TYPE
165 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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