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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
43
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
March, 2020
1
October, 2022
Available data
136
bed bed3+
33
bed bed9
3
bigWig
Organism
171
Homo sapiens
Biosample type
131
tissue
34
cell line
6
primary cell
Organ
704
epithelium
450
kidney
409
brain
408
connective tissue
355
musculature of body
309
lung
284
intestine
230
limb
222
pancreas
221
heart
221
vasculature
217
bodily fluid
206
blood
204
embryo
202
skin of body
171
large intestine
167
blood vessel
146
extraembryonic component
127
liver
116
stomach
108
eye
87
mammary gland
85
bone element
83
small intestine
81
uterus
77
prostate gland
73
placenta
71
adrenal gland
66
adipose tissue
64
penis
64
ureter
62
lymph node
61
artery
48
thymus
47
gonad
42
esophagus
39
spinal cord
32
spleen
25
testis
23
lymphoid tissue
22
thyroid gland
21
lymphatic vessel
21
ovary
21
vein
20
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
vagina
8
urinary bladder
5
trachea
4
nose
Project
165
AMP
6
ENCODE
Genome assembly (visualization)
169
hg19
43
GRCh38
annotation_type!
gene expression
month_released!
March, 2020
September, 2018
BIOSAMPLE
TYPE
171 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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