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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 971histone modifications
  • 907accessible chromatin
  • 877candidate regulatory elements
  • 817binding sites
  • gene expression
  • 523target gene predictions
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 111chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • September, 2022
  • 2413February, 2021
  • 333November, 2021
  • 304February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 32March, 2025
  • 26February, 2020
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4406bed bed3+
  • 2930tsv
  • 533bigWig
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 15bigBed narrowPeak
  • 2csv
  • 1bam
Organism
  • 7420Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1847ChIP-Atlas
  • 938ENCODE
  • 428DGA
  • 417AMP
  • 406T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 129 T2DKP
  • 110KPMP
  • 108T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1EpiMap
Biosample type
  • 3830tissue
  • 1789cell line
  • 1552primary cell
  • 291in vitro differentiated cells
  • 4stem cell
Organ
  • 2800vasculature
  • 2783bodily fluid
  • 2778blood
  • 2761blood vessel
  • 2651vein
  • 554epithelium
  • 309connective tissue
  • 268brain
  • 225kidney
  • 185pancreas
  • 164musculature of body
  • 128heart
  • 124embryo
  • 122intestine
  • 101limb
  • 100lung
  • 100skin of body
  • 92liver
  • 81eye
  • 74large intestine
  • 69uterus
  • 60adipose tissue
  • 49artery
  • 48stomach
  • 47extraembryonic component
  • 45mammary gland
  • 43bone element
  • 38lymph node
  • 38prostate gland
  • 34penis
  • 30adrenal gland
  • 27small intestine
  • 25placenta
  • 25ureter
  • 24gonad
  • 22esophagus
  • 18spinal cord
  • 16thymus
  • 15lymphatic vessel
  • 15spleen
  • 14nerve
  • 13testis
  • 12pituitary gland
  • 10bone marrow
  • 10bronchus
  • 10ovary
  • 10thyroid gland
  • 9skeleton
  • 8lymphoid tissue
  • 6breast
  • 6mouth
  • 5trachea
  • 3tongue
  • 3urinary bladder
  • 3vagina
  • 1nose
Project
  • 6928AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4479hg19
  • 1061GRCh38
  • 4hg18
annotation_type!
  • gene expression
month_released!
  • September, 2022
BIOSAMPLE
TYPE

7468 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
islet of Langerhans15211313222
kidney210151112
liver2461392211
heart15181122
cell line
HeLa-S32152
H1-hESC11238
K5621112171
breast cancer cell119
HFFc619
primary cell
monocyte8618124121
CD8-positive, alpha-beta T cell304751
endothelial cell115327122
fibroblast1631426
macrophage12339311
in vitro differentiated cells
neural progenitor cell151011
adipocyte142144
embryonic stem cell16115
hematopoietic multipotent progenitor cell1191
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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