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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1652candidate regulatory elements
  • 1273target gene predictions
  • 966histone modifications
  • 916chromatin state
  • 901accessible chromatin
  • 804binding sites
  • gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2430September, 2022
  • 2360February, 2021
  • 331November, 2021
  • 294May, 2021
  • 279June, 2020
  • 253February, 2024
  • 155May, 2020
  • 116March, 2020
  • 115September, 2023
  • 106January, 2022
  • 100October, 2022
  • 79August, 2021
  • 72January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 34August, 2017
  • 32February, 2023
  • 32March, 2025
  • 26February, 2020
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 5906bed bed3+
  • 2930tsv
  • 842bed bed9
  • 535bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9726Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2418EpiMap
  • 1815ChIP-Atlas
  • 907ENCODE
  • 423DGA
  • 422AMP
  • 404T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 130 T2DKP
  • 1234DN
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5172tissue
  • 2212cell line
  • 2017primary cell
  • 368in vitro differentiated cells
  • 3stem cell
Organ
  • 2875vasculature
  • 2858bodily fluid
  • 2847blood
  • 2821blood vessel
  • 2657vein
  • 705epithelium
  • 450kidney
  • 448brain
  • 429connective tissue
  • 368musculature of body
  • 310lung
  • 286intestine
  • 239limb
  • 236heart
  • 229pancreas
  • embryo
  • 202skin of body
  • 172large intestine
  • 146extraembryonic component
  • 138liver
  • 117stomach
  • 108eye
  • 87mammary gland
  • 85bone element
  • 84adipose tissue
  • 84small intestine
  • 81uterus
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 70artery
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 48gonad
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
Project
  • 9236AMP
  • 331ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6785hg19
  • 1820GRCh38
  • 4hg18
annotation_type!
  • gene expression
organ_slims!
  • embryo
BIOSAMPLE
TYPE

9774 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart3720121512
stomach402111931
kidney291421610111
brain29163182121
cell line
HeLa-S355531
A549211911812
K5627231712
MCF-7962513
breast cancer cell119
primary cell
monocyte2861814121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753014
B cell171086
endothelial cell371152122
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell5515410
adipocyte461641
embryonic stem cell11561
mesenchymal stem cell331211
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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