Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
candidate regulatory elements
55
target gene predictions
42
chromatin state
16
accessible chromatin
gene expression
3
eQTL
3
variant allelic effects
1
histone modifications
Date released
123
September, 2022
47
February, 2021
19
November, 2021
5
June, 2020
4
May, 2021
3
February, 2024
3
January, 2022
2
March, 2020
1
August, 2017
Available data
163
bed bed3+
41
bed bed9
11
bigWig
Organism
207
Homo sapiens
Biosample type
177
tissue
26
primary cell
4
cell line
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
188
AMP
19
ENCODE
Genome assembly (visualization)
204
hg19
63
GRCh38
annotation_type!
gene expression
organ_slims!
intestine
BIOSAMPLE
TYPE
207 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
variant allelic effects
histone modifications
tissue
stomach
40
21
19
3
1
1
adrenal gland
28
17
14
1
1
stomach smooth muscle
4
2
3
tongue
4
2
2
1
gastroesophageal sphincter
5
1
1
+ See 3 more…
primary cell
cortical cell of adrenal gland
2
3
1
fibroblast of gingiva
2
1
1
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
+ See 5 more…
cell line
ACC112
2
1
1
See all biosamples
Download