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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
112
target gene predictions
111
accessible chromatin
75
chromatin state
gene expression
44
binding sites
38
histone modifications
29
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
196
September, 2022
117
February, 2021
55
November, 2021
33
February, 2024
25
June, 2020
20
August, 2021
17
May, 2021
16
March, 2020
13
May, 2020
13
October, 2022
11
May, 2024
10
August, 2017
10
January, 2020
9
March, 2023
8
September, 2023
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
February, 2020
3
September, 2018
2
January, 2021
2
November, 2020
2
October, 2019
1
February, 2023
1
June, 2021
1
November, 2019
Available data
470
bed bed3+
68
bigWig
65
bed bed9
32
tsv
3
bigBed bed9
1
bam
1
bigBed narrowPeak
Organism
591
Homo sapiens
Biosample type
298
primary cell
183
tissue
57
cell line
52
in vitro differentiated cells
1
stem cell
Organ
706
epithelium
450
kidney
447
brain
419
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
236
heart
233
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
519
AMP
55
ENCODE
6
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
558
hg19
191
GRCh38
4
hg18
annotation_type!
gene expression
BIOSAMPLE
TYPE
591 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
hepatocyte
2
3
8
1
1
4
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 42 more…
tissue
liver
13
10
4
9
1
2
7
1
1
thymus
20
14
1
11
1
1
adipose tissue
7
8
2
6
1
4
1
omental fat pad
5
2
2
2
2
3
subcutaneous adipose tissue
2
2
1
6
1
1
3
+ See 8 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
hepatocyte
2
1
1
fibroblast
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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