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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
candidate regulatory elements
54
target gene predictions
45
chromatin state
14
accessible chromatin
9
binding sites
7
histone modifications
4
eQTL
gene expression
Date released
125
September, 2022
59
February, 2021
11
June, 2020
6
November, 2021
5
May, 2021
4
February, 2024
4
January, 2022
3
August, 2017
2
October, 2022
1
March, 2020
Available data
174
bed bed3+
42
bed bed9
3
bigWig
Organism
220
Homo sapiens
Biosample type
166
tissue
47
cell line
7
primary cell
Organ
706
epithelium
450
kidney
447
brain
419
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
236
heart
233
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
214
AMP
6
ENCODE
Genome assembly (visualization)
216
hg19
55
GRCh38
annotation_type!
gene expression
organ_slims!
lymph node
BIOSAMPLE
TYPE
220 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
testis
7
3
3
1
1
1
1
Peyer's patch
7
3
3
1
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
GM18507
1
2
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
+ See 6 more…
primary cell
colon epithelial cell
3
3
Leydig cell
1
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