Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 33differential activity
  • 25candidate regulatory elements
  • 24accessible chromatin
  • gene expression
  • 21target gene predictions
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 8eQTL
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 1caQTL
Date released
  • 46September, 2022
  • 30May, 2026
  • 22February, 2021
  • 16February, 2024
  • 10August, 2021
  • 6March, 2020
  • 5June, 2020
  • 5November, 2021
  • 3August, 2017
  • 3March, 2023
  • 3May, 2020
  • 3May, 2021
  • 2January, 2020
  • 2May, 2022
  • 2May, 2024
  • 1February, 2020
  • 1January, 2022
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 108bed bed3+
  • 14bed bed9
  • 14bigWig
  • 7tsv
  • 1bam
  • 1bigBed bed9
Organism
  • 163Homo sapiens
Collection Tags
  • 42EpiMap
  • 30pyxis
  • 29DGA
  • 26AMP
  • 18T2DKP
  • 17ChIP-Atlas
  • 12 T2DKP
  • 10ENCODE
  • 4GTEx
  • 3HPAP
  • 2FNIH_projects-liver
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 76primary cell
  • 55tissue
  • 28cell line
  • 4in vitro differentiated cells
Organ
  • 2868vasculature
  • 2852bodily fluid
  • 2841blood
  • 2822blood vessel
  • 2657vein
  • 708epithelium
  • 472connective tissue
  • 467kidney
  • 466brain
  • 375musculature of body
  • 349heart
  • 310lung
  • 286intestine
  • 253pancreas
  • 239limb
  • 205embryo
  • 202skin of body
  • 172large intestine
  • 163liver
  • 146extraembryonic component
  • 125adipose tissue
  • 117stomach
  • 108eye
  • 87mammary gland
  • 85bone element
  • 84small intestine
  • 81uterus
  • 77prostate gland
  • 75artery
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 60__MARKER__
  • 49thymus
  • 48gonad
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
Project
  • 158AMP
  • 5ENCODE
Genome assembly (visualization)
  • 126hg19
  • 53GRCh38
  • 2hg18
annotation_type!
  • gene expression
BIOSAMPLE
TYPE

163 results

search-icontable-tab-icon
Clear Filters
differential activity
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte42831412
hepatic stellate cell4231111
endothelial cell of hepatic sinusoid66
B cell4
cholangiocyte4
tissue
liver1341092171
right lobe of liver21113
cell line
HepG2223253
HuH-7111111
HuH-7.5111
hepatic stellate cell11
in vitro differentiated cells
hepatocyte211
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego