Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 65accessible chromatin
  • gene expression
  • 44target gene predictions
  • 33differential activity
  • 24candidate regulatory elements
  • 17chromatin state
  • 15eQTL
  • 11variant allelic effects
  • 6histone modifications
  • 5Fine-mapped variants
  • 5binding sites
  • 2sQTL
  • 2variant to gene
Date released
  • 44September, 2022
  • 38March, 2023
  • 25February, 2021
  • 22February, 2024
  • 20January, 2021
  • 18November, 2021
  • 15May, 2021
  • 8August, 2021
  • 7March, 2020
  • 6May, 2020
  • 6October, 2019
  • 4January, 2022
  • 4June, 2020
  • 3August, 2017
  • 3January, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2020
  • 1February, 2023
  • 1June, 2021
Available data
  • 171bed bed3+
  • 57bigWig
  • 37tsv
  • 14bigBed narrowPeak
  • 13bed bed9
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
Organism
  • 229Homo sapiens
Collection Tags
  • 50 T2DKP
  • 47T2DKP
  • 39EpiMap
  • 39HPAP
  • 32T1D
  • 27AMP
  • 24DGA
  • 14ChIP-Atlas
  • 11ENCODE
  • 9CMDGA
  • 7T2D
  • 4GTEx
  • 4eQTLCatalogue
Biosample type
  • 102primary cell
  • 101tissue
  • 26cell line
Organ
  • 2879vasculature
  • 2858bodily fluid
  • 2847blood
  • 2825blood vessel
  • 2657vein
  • 708epithelium
  • 450kidney
  • 448brain
  • 435connective tissue
  • 384musculature of body
  • 310lung
  • 286intestine
  • 239limb
  • 237heart
  • 229pancreas
  • 205embryo
  • 202skin of body
  • 172large intestine
  • 146extraembryonic component
  • 142liver
  • 117stomach
  • 108eye
  • 88adipose tissue
  • 87mammary gland
  • 85bone element
  • 84small intestine
  • 81uterus
  • 77prostate gland
  • 74artery
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 48gonad
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
Project
  • 189AMP
  • 20T1D
  • 18ENCODE
  • 2community
Genome assembly (visualization)
  • 186hg19
  • 61GRCh38
annotation_type!
  • gene expression
BIOSAMPLE
TYPE

229 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell633121
pancreatic beta cell8331
pancreatic alpha cell7331
pancreatic acinar cell6331
pancreatic delta cell5431
pancreatic stellate cell213
pancreatic polypeptide-secreting cell211
pancreatic A cell3
pancreatic alpha+beta cell3
pancreatic cycling alpha cell3
pancreatic gamma+epsilon cell3
pancreatic quiescent stellate cell3
type B pancreatic cell3
pancreatic endocrine cell11
islet of Langerhans1
tissue
islet of Langerhans61313112222
body of pancreas584113
pancreas55531111
endocrine pancreas474
pancreatic ductal cell2
pancreatic stellate cell2
pancreatic A cell1
pancreatic D cell1
pancreatic PP cell1
pancreatic acinar cell1
type B pancreatic cell1
cell line
EndoC_BH18131
Panc1221
8988T111
HPDE6-E6E7111
pancreatic acinar cell1
pancreatic ductal cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego