Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 28candidate regulatory elements
  • 11target gene predictions
  • 10chromatin state
  • 7binding sites
  • 5histone modifications
  • 3accessible chromatin
Date released
  • 30September, 2022
  • 28February, 2021
  • 3June, 2020
  • 2October, 2022
  • 1May, 2021
Available data
  • 54bed bed3+
  • 10bed bed9
Organism
  • 64Homo sapiens
Collection Tags
  • 30EpiMap
  • 20ENCODE
  • 13ChIP-Atlas
  • 1DGA
Biosample type
  • 41primary cell
  • 15cell line
  • 6in vitro differentiated cells
  • 2tissue
Organ
  • 2875vasculature
  • 2858bodily fluid
  • 2847blood
  • 2821blood vessel
  • 2657vein
  • 705epithelium
  • 450kidney
  • 448brain
  • 429connective tissue
  • 368musculature of body
  • 310lung
  • 286intestine
  • 239limb
  • 236heart
  • 229pancreas
  • 205embryo
  • 202skin of body
  • 172large intestine
  • 146extraembryonic component
  • 138liver
  • 117stomach
  • 108eye
  • 87mammary gland
  • 85bone element
  • 84adipose tissue
  • 84small intestine
  • 81uterus
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 70artery
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 48gonad
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
Project
  • 64AMP
Genome assembly (visualization)
  • 64hg19
  • 10GRCh38
annotation_type!
  • gene expression
BIOSAMPLE
TYPE

64 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
primary cell
foreskin keratinocyte1144
foreskin fibroblast621421
foreskin melanocyte411
cell line
EH211
EL211
ELR211
foreskin fibroblast111
in vitro differentiated cells
foreskin keratinocyte111
foreskin melanocyte111
tissue
skin of prepuce of penis11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego