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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
35
candidate regulatory elements
21
target gene predictions
17
chromatin state
8
binding sites
7
accessible chromatin
7
histone modifications
gene expression
2
eQTL
2
variant allelic effects
Date released
51
September, 2022
33
February, 2021
6
June, 2020
3
May, 2021
2
February, 2024
2
January, 2022
2
November, 2021
Available data
80
bed bed3+
17
bed bed9
1
bigWig
Organism
99
Homo sapiens
Biosample type
53
cell line
33
tissue
13
primary cell
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
0
pericardium
Project
97
AMP
2
ENCODE
Genome assembly (visualization)
97
hg19
21
GRCh38
annotation_type!
gene expression
organ_slims!
small intestine
BIOSAMPLE
TYPE
99 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
variant allelic effects
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 5 more…
tissue
thyroid gland
8
5
4
1
1
prostate gland
4
2
2
2
1
2
1
primary cell
epithelial cell of prostate
4
3
2
thyroid follicular cell
1
1
1
luminal epithelial cell of prostatic duct
1
See all biosamples
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