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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1107target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 2413February, 2021
  • 304February, 2024
  • 289June, 2020
  • 222November, 2021
  • 160May, 2021
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 32March, 2025
  • 26February, 2020
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 5834bed bed3+
  • 2930tsv
  • 869bed bed9
  • 537bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9681Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 938ENCODE
  • 327T1D
  • 313AMP
  • 295T2DKP
  • 290DGA
  • 181BLUEPRINT
  • 1744DN
  • 111T2D
  • 110KPMP
  • 107 T2DKP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5179tissue
  • 2283cell line
  • 1882primary cell
  • 379in vitro differentiated cells
  • 4stem cell
Organ
  • 2871vasculature
  • 2854bodily fluid
  • 2843blood
  • 2818blood vessel
  • 2656vein
  • 646epithelium
  • 450kidney
  • 437brain
  • 398connective tissue
  • 359musculature of body
  • 303lung
  • 272intestine
  • 236limb
  • 229heart
  • 215pancreas
  • 200embryo
  • 192skin of body
  • 164large intestine
  • 143extraembryonic component
  • 134liver
  • 111stomach
  • 108eye
  • 85bone element
  • 82mammary gland
  • 81adipose tissue
  • 81small intestine
  • 78uterus
  • 75prostate gland
  • 72placenta
  • 68artery
  • 66adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48thymus
  • 46gonad
  • 41esophagus
  • 41spinal cord
  • 32spleen
  • 25testis
  • 23lymphoid tissue
  • 23nerve
  • 20lymphatic vessel
  • 20ovary
  • 20thyroid gland
  • 18mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 11breast
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 2pituitary gland
Project
  • 9300AMP
  • 222ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6740hg19
  • 1789GRCh38
  • 4hg18
annotation_type!
  • gene expression
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

9729 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart3720121512
stomach401911931
kidney291421610111
brain29163182121
cell line
HeLa-S355431
A549211811812
H1-hESC1381112
K5627221712
MCF-7952513
primary cell
monocyte2861814121
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell723014
B cell17986
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell5515410
adipocyte421641
embryonic stem cell11561
mesenchymal stem cell321211
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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