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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 726binding sites
  • gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2413February, 2021
  • 1678September, 2022
  • 333November, 2021
  • 299February, 2024
  • 294May, 2021
  • 289June, 2020
  • 152May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 79August, 2021
  • 66January, 2020
  • 57March, 2023
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 32March, 2025
  • 26February, 2020
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 10October, 2022
  • 9October, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 5953bed bed3+
  • 2930tsv
  • 535bigWig
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 8896Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 847ENCODE
  • 423AMP
  • 419DGA
  • 404T2DKP
  • 327T1D
  • 1744DN
  • 147BLUEPRINT
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4696tissue
  • 2072cell line
  • 1819primary cell
  • 352in vitro differentiated cells
  • 3stem cell
Organ
  • 2838vasculature
  • 2812bodily fluid
  • 2803blood
  • 2791blood vessel
  • 2651vein
  • 647epithelium
  • 371kidney
  • 370brain
  • 370connective tissue
  • 293musculature of body
  • 235lung
  • 226intestine
  • 212pancreas
  • 189limb
  • 185heart
  • 176embryo
  • 163skin of body
  • 135large intestine
  • 120liver
  • 112extraembryonic component
  • 97eye
  • 93stomach
  • 76uterus
  • 74adipose tissue
  • 69bone element
  • 69mammary gland
  • 64prostate gland
  • 64small intestine
  • 61artery
  • 58adrenal gland
  • 56placenta
  • 52lymph node
  • 52penis
  • 51ureter
  • 39gonad
  • 38thymus
  • 36esophagus
  • 33spinal cord
  • 27spleen
  • 20testis
  • 19lymphatic vessel
  • 19nerve
  • 18lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 15skeleton
  • 14bronchus
  • 14mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 7tongue
  • 7urinary bladder
  • 7vagina
  • 5trachea
  • 3nose
Project
  • 8404AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5955hg19
  • 1031GRCh38
  • 4hg18
annotation_type!
  • gene expression
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

8944 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart37201512
stomach4021131
kidney2914210111
brain291632121
cell line
HeLa-S3555
A5492119111
H1-hESC139111
K562723111
MCF-796212
primary cell
monocyte2861814121
CD8-positive, alpha-beta T cell75304
common myeloid progenitor, CD34-positive2714
B cell17106
endothelial cell371152122
in vitro differentiated cells
neural progenitor cell551510
hematopoietic multipotent progenitor cell1910111
adipocyte46141
embryonic stem cell1161
mesenchymal stem cell33111
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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