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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 871candidate regulatory elements
  • 817binding sites
  • gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 1576February, 2021
  • 333November, 2021
  • 303February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 57March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 32March, 2025
  • 26February, 2020
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 5246bed bed3+
  • 2930tsv
  • 869bed bed9
  • 537bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9093Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 429DGA
  • 424AMP
  • 406T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 100ENCODE
  • 96GTEx
  • 54HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4729tissue
  • 2183cell line
  • 1871primary cell
  • 352in vitro differentiated cells
  • 4stem cell
Organ
  • 2849vasculature
  • 2836bodily fluid
  • 2827blood
  • 2801blood vessel
  • 2653vein
  • 653epithelium
  • 397brain
  • 389connective tissue
  • 366kidney
  • 290musculature of body
  • 249lung
  • 228intestine
  • 218pancreas
  • 202heart
  • 191limb
  • 175embryo
  • 161skin of body
  • 136large intestine
  • 129liver
  • 120extraembryonic component
  • 99eye
  • 89stomach
  • 76uterus
  • 74bone element
  • 73adipose tissue
  • 73mammary gland
  • 66artery
  • 66small intestine
  • 63prostate gland
  • 60placenta
  • 58adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 40thymus
  • 39gonad
  • 34spinal cord
  • 33esophagus
  • 24spleen
  • 20nerve
  • 20testis
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 17skeleton
  • 14bronchus
  • 14mouth
  • 12bone marrow
  • 12pituitary gland
  • 9breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 4nose
Project
  • 8601AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6152hg19
  • 1900GRCh38
  • 4hg18
annotation_type!
  • gene expression
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

9141 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart2012151912
stomach211193191
brain16318216121
kidney142161014111
cell line
HeLa-S355331
A549191181182
H1-hESC3911112
K5622317162
MCF-7625153
primary cell
monocyte2861814121
CD8-positive, alpha-beta T cell53014
common myeloid progenitor, CD34-positive141313
B cell108611
endothelial cell711532122
in vitro differentiated cells
neural progenitor cell5154104
hematopoietic multipotent progenitor cell101101101
adipocyte616421
embryonic stem cell11561
mesenchymal stem cell312121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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