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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 944chromatin state
  • gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 93binding sites
  • 84Fine-mapped variants
  • 74accessible chromatin
  • 13caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2499September, 2022
  • 844February, 2021
  • 250February, 2024
  • 155May, 2020
  • 153May, 2021
  • 117March, 2020
  • 115September, 2023
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 57March, 2023
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 32August, 2021
  • 32March, 2025
  • 28January, 2021
  • 26February, 2020
  • 19April, 2020
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 7January, 2020
  • 5October, 2019
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
Available data
  • 3551bed bed3+
  • 2930tsv
  • 869bed bed9
  • 81bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 7bigBed narrowPeak
  • 2csv
  • 1bam
Organism
  • 7385Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 932ENCODE
  • 356DGA
  • 1744DN
  • 158T1D
  • 152AMP
  • 148T2DKP
  • 110KPMP
  • 101T2D
  • 101eQTLCatalogue
  • 97 T2DKP
  • 96GTEx
  • 60BLUEPRINT
  • 42HPAP
  • 37STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 4893tissue
  • 1329primary cell
  • 1010cell line
  • 195in vitro differentiated cells
  • 4stem cell
Organ
  • 2818vasculature
  • 2794bodily fluid
  • 2785blood
  • 2778blood vessel
  • 2653vein
  • 435epithelium
  • 392kidney
  • 350brain
  • 328musculature of body
  • 299connective tissue
  • 289lung
  • 252intestine
  • 215limb
  • 199heart
  • 170embryo
  • 162skin of body
  • 156pancreas
  • 152large intestine
  • 130extraembryonic component
  • 108stomach
  • 89liver
  • 81small intestine
  • 74adipose tissue
  • 73uterus
  • 66mammary gland
  • 65adrenal gland
  • 64placenta
  • 60ureter
  • 57bone element
  • 57prostate gland
  • 51penis
  • 49artery
  • 45thymus
  • 41eye
  • 40gonad
  • 40lymph node
  • 39esophagus
  • 39spinal cord
  • 30spleen
  • 20lymphoid tissue
  • 20nerve
  • 20ovary
  • 20testis
  • 20thyroid gland
  • 17mouth
  • 15lymphatic vessel
  • 11breast
  • 11bronchus
  • 11pituitary gland
  • 10skeleton
  • 9vagina
  • 8tongue
  • 8urinary bladder
  • 7bone marrow
  • 3nose
Project
  • 7143AMP
  • 111ENCODE
  • 110KPMP
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4453hg19
  • 1406GRCh38
  • 4hg18
annotation_type!
  • gene expression
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

7433 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
eQTL
differential activity
variant allelic effects
binding sites
Fine-mapped variants
accessible chromatin
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
stomach4021191
heart3720212
lung3317161
brain29161821
primary cell
common myeloid progenitor, CD34-positive271413
B cell171083
CD4-positive, alpha-beta memory T cell1499
CD14-positive monocyte8194
CD8-positive, alpha-beta memory T cell877
cell line
HeLa-S355531
A5492119181
H1-hESC13911
K56272371
MCF-79651
in vitro differentiated cells
hematopoietic multipotent progenitor cell191010
adipocyte466
neural progenitor cell554
endodermal cell422
mesenchymal stem cell332
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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