Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
225
candidate regulatory elements
124
target gene predictions
12
accessible chromatin
11
binding sites
9
variant allelic effects
6
gene expression
6
histone modifications
1
chromatin state
Date released
232
September, 2022
122
February, 2021
12
June, 2020
8
May, 2020
7
May, 2021
4
October, 2022
3
February, 2020
2
March, 2024
1
August, 2017
1
February, 2024
1
January, 2020
1
March, 2020
Available data
391
bed bed3+
6
tsv
bigWig
Organism
394
Homo sapiens
Biosample type
296
tissue
79
cell line
19
primary cell
Organ
658
epithelium
539
kidney
329
connective tissue
314
brain
276
musculature of body
228
lung
210
intestine
192
pancreas
174
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
126
blood vessel
109
extraembryonic component
96
liver
86
stomach
67
mammary gland
65
adipose tissue
65
bone element
64
prostate gland
63
eye
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
45
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
15
lymphatic vessel
14
mouth
14
nerve
12
pituitary gland
11
bronchus
10
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
394
AMP
Genome assembly (visualization)
523
hg19
GRCh38
annotation_type!
hQTL
assembly!
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
394 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
gene expression
histone modifications
chromatin state
tissue
lung
33
17
1
muscle of arm
33
16
1
muscle of leg
27
14
1
left lung
26
13
right lung
22
11
1
+ See 16 more…
cell line
A549
21
19
1
2
1
IMR-90
2
2
1
2
1
PC-9
2
2
1
1
1
GM23248
2
1
1
1
1
WI38
5
1
+ See 4 more…
primary cell
fibroblast of lung
6
4
2
1
lung microvascular endothelial cell
3
1
fibroblast of arm
1
type II pneumocyte
1
See all biosamples
Download