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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
112
candidate regulatory elements
63
target gene predictions
59
chromatin state
10
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
Date released
164
September, 2022
71
February, 2021
10
June, 2020
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
203
bed bed3+
55
bed bed9
3
tsv
Organism
264
Homo sapiens
Biosample type
231
tissue
32
cell line
1
primary cell
Organ
572
epithelium
508
kidney
465
brain
374
connective tissue
349
musculature of body
298
lung
264
intestine
244
limb
242
heart
212
pancreas
208
vasculature
193
skin of body
190
bodily fluid
179
blood
165
large intestine
164
blood vessel
162
embryo
143
extraembryonic component
124
liver
108
stomach
104
eye
87
adipose tissue
86
bone element
80
mammary gland
80
small intestine
77
prostate gland
71
placenta
70
artery
64
penis
64
ureter
62
adrenal gland
62
lymph node
48
gonad
48
thymus
spinal cord
39
esophagus
34
spleen
30
uterus
26
testis
25
nerve
23
lymphoid tissue
23
vein
21
ovary
20
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
pituitary gland
12
bronchus
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
264
AMP
19
ENCODE
Genome assembly (visualization)
258
hg19
58
GRCh38
annotation_type!
hQTL
month_released!
February, 2024
organ_slims!
spinal cord
BIOSAMPLE
TYPE
264 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
tissue
small intestine
29
17
15
1
1
large intestine
26
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 15 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
2
1
1
RKO
1
1
1
1
+ See 3 more…
primary cell
intestinal epithelial cell
1
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