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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
162
gene expression
120
accessible chromatin
116
candidate regulatory elements
66
target gene predictions
57
chromatin state
43
binding sites
43
variant allelic effects
28
differential activity
28
histone modifications
5
eQTL
3
Fine-mapped variants
2
caQTL
Date released
199
February, 2021
160
September, 2022
76
February, 2024
36
March, 2023
34
May, 2021
26
June, 2020
23
August, 2021
18
May, 2020
15
January, 2020
15
November, 2022
12
February, 2020
12
February, 2023
10
May, 2024
9
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
2
November, 2019
1
January, 2022
1
July, 2020
Available data
417
bed bed3+
175
tsv
83
bigWig
78
txt
54
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
673
Homo sapiens
Biosample type
520
primary cell
86
tissue
41
cell line
26
in vitro differentiated cells
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
673
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
478
hg19
128
GRCh38
annotation_type!
hQTL
BIOSAMPLE
TYPE
673 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
7
2
2
1
1
2
4
endothelial cell
9
4
3
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 88 more…
tissue
tibial nerve
2
3
6
3
4
2
2
3
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
+ See 16 more…
cell line
EndoC_BH1
8
8
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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