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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
20
target gene predictions
17
gene expression
14
histone modifications
13
binding sites
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
2
chromatin state
1
caQTL
1
eQTL
Date released
30
September, 2022
26
February, 2024
25
February, 2021
6
March, 2020
5
June, 2020
5
November, 2021
4
August, 2021
4
March, 2023
3
January, 2020
3
May, 2021
2
August, 2017
2
February, 2020
2
May, 2020
2
May, 2022
2
May, 2024
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
100
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
125
Homo sapiens
Biosample type
58
primary cell
42
tissue
25
cell line
in vitro differentiated cells
Organ
856
epithelium
559
kidney
372
brain
357
connective tissue
293
musculature of body
240
lung
232
pancreas
231
intestine
228
vasculature
203
heart
192
limb
191
bodily fluid
182
blood
170
blood vessel
164
embryo
158
skin of body
139
large intestine
125
liver
108
extraembryonic component
95
stomach
94
eye
78
uterus
74
bone element
70
adipose tissue
70
mammary gland
64
prostate gland
64
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
51
ureter
48
penis
39
gonad
38
thymus
35
esophagus
34
spinal cord
27
spleen
20
lymphatic vessel
20
nerve
20
testis
19
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
Project
120
AMP
5
ENCODE
Genome assembly (visualization)
103
hg19
47
GRCh38
1
hg18
annotation_type!
hQTL
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
125 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
histone modifications
binding sites
differential activity
Fine-mapped variants
variant allelic effects
chromatin state
caQTL
eQTL
primary cell
hepatocyte
8
2
3
9
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
2
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
10
1
2
1
1
1
1
right lobe of liver
2
1
1
3
1
cell line
HepG2
2
2
3
5
3
1
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
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