Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
459
gene expression
422
accessible chromatin
368
target gene predictions
326
candidate regulatory elements
205
histone modifications
191
chromatin state
149
differential activity
93
binding sites
77
variant allelic effects
46
eQTL
11
caQTL
hQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
449
February, 2021
328
November, 2021
281
September, 2023
250
May, 2021
127
February, 2024
56
January, 2021
51
June, 2020
51
March, 2023
40
May, 2022
39
August, 2021
38
May, 2020
37
January, 2022
31
October, 2022
19
April, 2020
19
January, 2020
16
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
3
November, 2020
2
May, 2024
1
June, 2021
1
March, 2020
1
March, 2024
Available data
1509
bed bed3+
573
tsv
346
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2354
Homo sapiens
Biosample type
2562
tissue
2354
primary cell
2324
cell line
458
in vitro differentiated cells
4
stem cell
Organ
817
epithelium
309
kidney
282
connective tissue
167
vasculature
126
pancreas
112
blood vessel
100
skin of body
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
18
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1665
AMP
328
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1709
hg19
667
GRCh38
annotation_type!
hQTL
files.file_type!
bigBed bed9
organ_slims!
liver
BIOSAMPLE
TYPE
2354 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
meQTL
sQTL
other
primary cell
monocyte
15
16
2
86
1
4
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
2
5
7
30
1
endothelial cell
9
15
7
1
2
2
1
2
B cell
2
4
10
14
8
+ See 444 more…
See all biosamples
Download