Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
accessible chromatin
371
target gene predictions
365
candidate regulatory elements
histone modifications
98
binding sites
76
variant allelic effects
11
caQTL
6
chromatin state
5
eQTL
3
hQTL
2
meQTL
other
Date released
331
November, 2021
324
September, 2022
240
February, 2021
103
February, 2024
81
May, 2020
64
May, 2021
56
January, 2021
51
June, 2020
39
May, 2024
30
October, 2022
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2022
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1415
bed bed3+
591
tsv
408
bigWig
163
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1370
Homo sapiens
Biosample type
1718
tissue
1539
cell line
1415
primary cell
254
in vitro differentiated cells
4
stem cell
Organ
438
epithelium
204
connective tissue
104
vasculature
79
skin of body
68
blood vessel
67
pancreas
52
kidney
38
mammary gland
38
musculature of body
35
liver
33
penis
31
brain
30
extraembryonic component
30
lung
25
heart
22
intestine
19
eye
17
artery
17
embryo
15
vein
13
bronchus
13
lymphatic vessel
11
adrenal gland
11
stomach
9
bone element
9
bone marrow
9
esophagus
placenta
8
prostate gland
7
blood
7
bodily fluid
6
large intestine
4
small intestine
4
uterus
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
3
trachea
2
ovary
1
limb
1
thymus
Project
1006
AMP
331
ENCODE
59
T1D
19
LungMap
Genome assembly (visualization)
1409
hg19
448
GRCh38
annotation_type!
histone modifications
other
organ_slims!
placenta
BIOSAMPLE
TYPE
1415 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
variant allelic effects
caQTL
chromatin state
eQTL
hQTL
meQTL
primary cell
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
17
endothelial cell
15
7
3
2
2
2
1
fibroblast
16
4
3
1
6
CD14-positive monocyte
19
8
+ See 306 more…
See all biosamples
Download