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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
41
February, 2021
7
June, 2020
3
August, 2017
3
November, 2021
2
January, 2022
2
March, 2024
1
February, 2024
1
October, 2022
Available data
88
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
125
Homo sapiens
Biosample type
99
tissue
23
cell line
3
primary cell
Organ
792
epithelium
571
kidney
354
connective tissue
342
brain
288
musculature of body
227
pancreas
226
lung
224
vasculature
208
intestine
200
heart
193
limb
blood vessel
147
skin of body
136
bodily fluid
128
blood
125
large intestine
121
liver
120
embryo
105
extraembryonic component
96
eye
88
stomach
75
adipose tissue
67
bone element
63
mammary gland
62
artery
61
small intestine
56
prostate gland
53
placenta
52
adrenal gland
51
ureter
49
lymph node
48
penis
38
gonad
35
esophagus
34
spinal cord
34
thymus
26
spleen
23
uterus
22
nerve
21
testis
18
vein
17
lymphoid tissue
17
thyroid gland
16
lymphatic vessel
16
ovary
15
mouth
15
skeleton
11
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
trachea
2
pituitary gland
1
pericardium
Project
122
AMP
3
ENCODE
Genome assembly (visualization)
121
hg19
38
GRCh38
annotation_type!
histone modifications
target gene predictions
award.project!
LungMap
organ_slims!
blood vessel
BIOSAMPLE
TYPE
125 results
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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
tissue
large intestine
27
13
1
sigmoid colon
10
5
1
transverse colon
8
4
1
1
colonic mucosa
4
3
mucosa of rectum
4
3
+ See 7 more…
cell line
HT-29
2
1
1
1
SW480
2
1
1
1
HCT-116 cell
1
2
HCT116
2
1
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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