Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
184
candidate regulatory elements
target gene predictions
94
chromatin state
74
accessible chromatin
60
differential activity
20
binding sites
histone modifications
20
variant allelic effects
12
eQTL
3
Fine-mapped variants
1
caQTL
Date released
201
February, 2021
178
September, 2022
140
September, 2023
35
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
11
February, 2020
10
March, 2020
7
November, 2021
4
March, 2023
3
August, 2017
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
2
May, 2024
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
296
bed bed3+
279
tsv
91
bed bed9
87
txt
59
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
694
Homo sapiens
Biosample type
356
primary cell
283
tissue
48
cell line
7
in vitro differentiated cells
Organ
809
epithelium
571
kidney
365
connective tissue
342
brain
288
musculature of body
230
vasculature
229
lung
227
pancreas
208
intestine
202
heart
193
limb
173
blood vessel
147
skin of body
136
bodily fluid
128
blood
125
large intestine
123
liver
120
embryo
105
extraembryonic component
96
eye
88
stomach
75
adipose tissue
67
bone element
63
mammary gland
62
artery
61
small intestine
56
prostate gland
53
placenta
52
adrenal gland
51
ureter
49
lymph node
48
penis
38
gonad
35
esophagus
34
spinal cord
34
thymus
26
spleen
23
uterus
22
nerve
21
testis
20
lymphatic vessel
18
vein
17
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
12
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
trachea
2
pituitary gland
1
pericardium
Project
547
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
397
hg19
159
GRCh38
2
hg18
annotation_type!
histone modifications
target gene predictions
BIOSAMPLE
TYPE
694 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
2
1
8
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
2
+ See 68 more…
tissue
kidney
7
29
16
10
1
1
1
liver
1
13
9
4
1
1
7
1
right kidney
20
10
1
1
renal cortex interstitium
20
9
1
1
renal pelvis
19
9
2
1
+ See 17 more…
cell line
HepG2
2
2
2
3
HEK293
3
1
1
2
ACHN
2
1
1
Caki2
2
1
1
HuH-7
1
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
Download