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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
73
gene expression
target gene predictions
51
candidate regulatory elements
37
differential activity
36
chromatin state
24
eQTL
histone modifications
18
binding sites
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
62
September, 2022
54
February, 2024
51
March, 2023
44
February, 2021
26
May, 2021
15
August, 2021
15
November, 2021
13
March, 2020
10
January, 2021
9
June, 2020
9
May, 2020
7
August, 2018
6
August, 2017
6
January, 2020
6
January, 2022
6
October, 2019
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
October, 2022
1
September, 2018
Available data
179
bed bed3+
105
tsv
77
bigWig
29
bed bed9
11
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
356
Homo sapiens
Biosample type
153
primary cell
150
tissue
44
cell line
9
in vitro differentiated cells
Organ
799
epithelium
571
kidney
357
connective tissue
342
brain
288
musculature of body
229
lung
227
pancreas
227
vasculature
208
intestine
200
heart
193
limb
173
blood vessel
147
skin of body
136
bodily fluid
128
blood
125
large intestine
121
liver
120
embryo
105
extraembryonic component
96
eye
88
stomach
75
adipose tissue
67
bone element
63
mammary gland
62
artery
61
small intestine
56
prostate gland
53
placenta
52
adrenal gland
51
ureter
49
lymph node
48
penis
38
gonad
35
esophagus
34
spinal cord
34
thymus
26
spleen
23
uterus
22
nerve
21
testis
18
vein
17
lymphatic vessel
17
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
12
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
trachea
2
pituitary gland
1
pericardium
Project
329
AMP
15
ENCODE
10
T1D
2
community
Genome assembly (visualization)
231
hg19
109
GRCh38
2
hg18
annotation_type!
histone modifications
target gene predictions
BIOSAMPLE
TYPE
356 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
1
1
1
2
endothelial cell of hepatic sinusoid
6
4
6
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic ductal cell
6
3
3
1
1
+ See 15 more…
tissue
islet of Langerhans
6
11
3
13
2
1
2
2
2
liver
4
1
13
1
9
7
1
1
body of pancreas
2
8
4
1
1
3
pancreas
5
5
3
1
1
1
endocrine pancreas
7
4
+ See 9 more…
cell line
EndoC_BH1
8
8
3
1
HepG2
2
2
2
3
HuH-7
1
1
1
1
Panc1
2
1
8988T
1
1
+ See 4 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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