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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
21
gene expression
20
target gene predictions
16
chromatin state
histone modifications
13
binding sites
8
eQTL
4
differential activity
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
39
September, 2022
25
February, 2024
18
February, 2021
10
March, 2020
7
August, 2021
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2021
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
83
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
133
Homo sapiens
Biosample type
56
primary cell
56
tissue
21
cell line
in vitro differentiated cells
Organ
866
epithelium
629
kidney
396
brain
383
connective tissue
359
musculature of body
306
lung
278
intestine
257
pancreas
244
vasculature
240
heart
234
limb
193
bodily fluid
189
blood vessel
183
blood
183
skin of body
176
embryo
169
large intestine
136
extraembryonic component
133
liver
116
stomach
97
eye
84
adipose tissue
84
small intestine
83
bone element
81
uterus
79
mammary gland
72
adrenal gland
70
placenta
70
prostate gland
66
artery
ureter
58
lymph node
55
penis
49
gonad
48
thymus
43
esophagus
43
spinal cord
34
spleen
25
testis
23
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
14
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
3
trachea
1
pericardium
Project
128
AMP
5
ENCODE
Genome assembly (visualization)
105
hg19
54
GRCh38
2
hg18
annotation_type!
histone modifications
variant allelic effects
biosample_type!
in vitro differentiated cells
organ_slims!
ureter
BIOSAMPLE
TYPE
133 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
binding sites
eQTL
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
2
13
3
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
2
1
1
1
pancreatic endothelial cell
1
3
tissue
liver
4
13
1
10
9
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
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