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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
gene expression
21
accessible chromatin
19
candidate regulatory elements
16
target gene predictions
8
binding sites
8
eQTL
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
2
chromatin state
1
caQTL
Date released
29
February, 2024
22
September, 2022
14
February, 2021
9
March, 2020
6
August, 2021
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
69
bed bed3+
28
tsv
22
bigWig
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
110
Homo sapiens
Biosample type
56
primary cell
48
tissue
cell line
6
in vitro differentiated cells
Organ
828
epithelium
537
kidney
371
connective tissue
291
brain
284
musculature of body
228
pancreas
216
vasculature
199
intestine
197
heart
187
limb
165
blood vessel
164
lung
110
liver
109
large intestine
106
extraembryonic component
106
skin of body
95
stomach
88
eye
78
adipose tissue
65
embryo
65
small intestine
59
adrenal gland
59
artery
52
placenta
51
ureter
41
mammary gland
38
esophagus
38
penis
37
thymus
35
gonad
32
spinal cord
29
bone element
28
spleen
21
nerve
19
ovary
19
prostate gland
19
thyroid gland
17
vein
16
lymphatic vessel
15
skeleton
15
testis
15
uterus
14
lymphoid tissue
12
bronchus
12
mouth
11
bodily fluid
11
breast
10
blood
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
2
pituitary gland
1
pericardium
Project
105
AMP
5
ENCODE
Genome assembly (visualization)
79
hg19
38
GRCh38
1
hg18
annotation_type!
histone modifications
award.project!
LungMap
biosample_type!
cell line
files.file_type!
bed bed9
BIOSAMPLE
TYPE
110 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
primary cell
hepatocyte
13
8
1
3
1
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
1
4
13
10
1
7
1
2
1
right lobe of liver
1
2
1
1
3
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
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