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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 187eQTL
  • 163differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2505September, 2022
  • 1750February, 2021
  • 378February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 275May, 2021
  • 155May, 2020
  • 128March, 2020
  • 111August, 2021
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5108bed bed3+
  • 3574tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9630Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1007ChIP-Atlas
  • 966ENCODE
  • 646DGA
  • 512AMP
  • 403T2DKP
  • 307T1D
  • 281KPMP
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 117BLUEPRINT
  • 111T2D
  • 101eQTLCatalogue
  • 91CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
Biosample type
  • 5234tissue
  • 2303primary cell
  • 1759cell line
  • 376in vitro differentiated cells
  • 4stem cell
Organ
  • 2905vasculature
  • 2842blood vessel
  • 2834bodily fluid
  • 2824blood
  • 2657vein
  • 928epithelium
  • 646kidney
  • 451connective tissue
  • 419brain
  • 373musculature of body
  • 307lung
  • 281intestine
  • 269pancreas
  • 251heart
  • 242limb
  • 204embryo
  • 191skin of body
  • 169large intestine
  • 149liver
  • 141extraembryonic component
  • 118stomach
  • 105eye
  • 98adipose tissue
  • 84small intestine
  • 83bone element
  • 82mammary gland
  • 81uterus
  • 74artery
  • 73adrenal gland
  • 71prostate gland
  • 70placenta
  • 64ureter
  • 59penis
  • 58lymph node
  • 49gonad
  • 48thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 25nerve
  • 25testis
  • 23lymphatic vessel
  • 23lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13breast
  • 12pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 8980AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • community
  • 5ITG
Genome assembly (visualization)
  • 6026hg19
  • 1804GRCh38
  • 4hg18
annotation_type!
  • histone modifications
award.project!
  • community
BIOSAMPLE
TYPE

9678 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720215132
stomach402119311
kidney291416101711
brain29161821121
primary cell
common myeloid progenitor, CD34-positive271413
monocyte2181154211
B cell1710862
endothelial cell371529122
macrophage331229311
cell line
HeLa-S355531
A54921191812
H1-hESC1391128
K562723712
MCF-796513
in vitro differentiated cells
hematopoietic multipotent progenitor cell191010111
neural progenitor cell554107
adipocyte466411
embryonic stem cell1561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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