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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3013target gene predictions
  • 2638pQTL
  • 1671candidate regulatory elements
  • 1186accessible chromatin
  • histone modifications
  • 944chromatin state
  • 811binding sites
  • 632gene expression
  • 484differential activity
  • 165eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2505September, 2022
  • 1984July, 2026
  • 1743February, 2021
  • 333November, 2021
  • 320February, 2024
  • 320May, 2026
  • 289June, 2020
  • 281September, 2023
  • 275May, 2021
  • 155May, 2020
  • 128March, 2020
  • 106January, 2022
  • 96October, 2022
  • 89January, 2020
  • 70March, 2023
  • 65August, 2021
  • 64February, 2020
  • 56January, 2021
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 6985bed bed3+
  • 3489tsv
  • 869bed bed9
  • 512bigWig
  • 87txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11742Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1458ENCODE-rE2G
  • 1007ChIP-Atlas
  • 960ENCODE
  • 529DGA
  • 491AMP
  • 403T2DKP
  • 393HDMA
  • 320pyxis
  • 307T1D
  • 281KPMP
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 133CATlas
  • 117BLUEPRINT
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 67HPAP
Biosample type
  • 5847tissue
  • 3550primary cell
  • 1975cell line
  • 413in vitro differentiated cells
  • 3stem cell
Organ
  • 3341blood
  • 2880vasculature
  • 2841blood vessel
  • 2828bodily fluid
  • 2658vein
  • 872epithelium
  • 852brain
  • 715kidney
  • 480connective tissue
  • 456heart
  • 436lung
  • 353musculature of body
  • 350intestine
  • 313pancreas
  • 283skin of body
  • 242limb
  • 221large intestine
  • 204embryo
  • 190liver
  • 169extraembryonic component
  • 157eye
  • 141adipose tissue
  • 139stomach
  • 111muscle organ
  • 102adrenal gland
  • 100bone element
  • 99mammary gland
  • 97small intestine
  • 94placenta
  • 92thymus
  • 91uterus
  • 83artery
  • 80prostate gland
  • 73ureter
  • 63gonad
  • 63spleen
  • 60__MARKER__
  • 59penis
  • 58lymph node
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 30testis
  • 25nerve
  • 24skeleton
  • 23lymphoid tissue
  • 21mouth
  • 20lymphatic vessel
  • 15breast
  • 15bronchus
  • 13urinary bladder
  • 12pituitary gland
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 4nose
  • 3trachea
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11075AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5907hg19
  • 3713GRCh38
  • 4hg18
annotation_type!
  • histone modifications
award.rfa!
  • AMP2
BIOSAMPLE
TYPE

11790 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38375211412
stomach424031911
head of caudate nucleus86
brain30292181121
primary cell
fibroblast283811026
endothelial cell1720252521
T-cell644
common myeloid progenitor, CD34-positive262713
CD4-positive, alpha-beta T cell52813
cell line
A54933211182
HeLa-S359531
H1-hESC3911128
K562307172
MCF-7139153
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911011
neural progenitor cell651047
adipocyte744611
embryonic stem cell1551
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
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