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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1630candidate regulatory elements
  • 1292target gene predictions
  • 900chromatin state
  • histone modifications
  • 844accessible chromatin
  • 779binding sites
  • 615gene expression
  • 189eQTL
  • 172differential activity
  • 135variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2639February, 2025
  • 2400September, 2022
  • 1641February, 2021
  • 346February, 2024
  • 333November, 2021
  • 282September, 2023
  • 268June, 2020
  • 236May, 2021
  • 148May, 2020
  • 118March, 2020
  • 103January, 2022
  • 101October, 2022
  • 94August, 2021
  • 86January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 31August, 2017
  • 30March, 2024
  • 26November, 2022
  • 19April, 2020
  • 12November, 2019
  • 12October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4854bed bed3+
  • 3501tsv
  • 829bed bed9
  • 534bigWig
  • 108txt
  • 35bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9267Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2394EpiMap
  • 948ChIP-Atlas
  • 919ENCODE
  • 598DGA
  • 429AMP
  • 399T2DKP
  • 307T1D
  • 281KPMP
  • 1744DN
  • 167 T2DKP
  • 151GTEx
  • 117BLUEPRINT
  • 111T2D
  • 101eQTLCatalogue
  • 77CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
Biosample type
  • 5234tissue
  • 2307primary cell
  • 1768cell line
  • in vitro differentiated cells
  • 4stem cell
Organ
  • 2903vasculature
  • 2842blood vessel
  • 2834bodily fluid
  • 2824blood
  • 2657vein
  • 906epithelium
  • 645kidney
  • 415brain
  • 409connective tissue
  • 371musculature of body
  • 307lung
  • 281intestine
  • 268pancreas
  • 250heart
  • 242limb
  • 184skin of body
  • 176embryo
  • 169large intestine
  • 142liver
  • 136extraembryonic component
  • 118stomach
  • 99eye
  • 97adipose tissue
  • 84small intestine
  • 83bone element
  • 81uterus
  • 80mammary gland
  • 74artery
  • 73adrenal gland
  • 71prostate gland
  • 70placenta
  • 64ureter
  • 58lymph node
  • 55penis
  • 49gonad
  • 48thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 25nerve
  • 25testis
  • 23lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 21lymphatic vessel
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13breast
  • 12pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 3trachea
  • 1pericardium
Project
  • 8604AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5732hg19
  • 1752GRCh38
  • 4hg18
annotation_type!
  • histone modifications
biosample_type!
  • in vitro differentiated cells
BIOSAMPLE
TYPE

9315 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood26351
heart3720215132
stomach402119311
kidney291416101711
brain29161821121
primary cell
common myeloid progenitor, CD34-positive271413
monocyte2181154121
B cell1710862
endothelial cell371529122
macrophage331229311
cell line
HeLa-S355531
A54921191812
H1-hESC1391128
K562723712
MCF-796513
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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