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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
169
Homo sapiens
Biosample type
132
tissue
31
cell line
6
primary cell
Organ
916
epithelium
627
kidney
432
connective tissue
398
brain
363
musculature of body
307
lung
281
intestine
265
pancreas
246
vasculature
240
heart
232
limb
203
embryo
193
bodily fluid
191
skin of body
187
blood vessel
183
blood
169
large intestine
141
extraembryonic component
141
liver
118
stomach
103
eye
85
adipose tissue
84
small intestine
82
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
placenta
65
artery
61
ureter
59
penis
58
lymph node
49
gonad
47
thymus
45
esophagus
43
spinal cord
34
spleen
25
testis
23
lymphatic vessel
23
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
20
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
163
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
43
GRCh38
annotation_type!
histone modifications
biosample_type!
stem cell
month_released!
May, 2020
BIOSAMPLE
TYPE
169 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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