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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
accessible chromatin
41
target gene predictions
35
gene expression
33
differential activity
20
candidate regulatory elements
13
chromatin state
8
variant allelic effects
histone modifications
4
binding sites
Date released
43
September, 2022
41
March, 2023
30
May, 2021
21
November, 2021
20
January, 2021
15
February, 2024
13
February, 2021
7
August, 2018
5
October, 2019
4
June, 2020
1
February, 2023
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
1
October, 2022
Available data
122
bed bed3+
59
tsv
44
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
205
Homo sapiens
Biosample type
tissue
161
primary cell
36
cell line
8
in vitro differentiated cells
Organ
863
epithelium
349
kidney
341
connective tissue
189
bodily fluid
180
blood
175
vasculature
172
embryo
168
skin of body
159
pancreas
127
lung
115
blood vessel
112
brain
86
liver
81
mammary gland
69
uterus
65
musculature of body
61
bone element
58
lymph node
58
penis
58
prostate gland
53
intestine
46
extraembryonic component
37
eye
37
heart
37
large intestine
29
artery
21
vein
20
lymphatic vessel
15
bronchus
12
placenta
11
adrenal gland
11
bone marrow
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
mouth
8
testis
7
limb
7
spinal cord
5
lymphoid tissue
4
adipose tissue
4
nose
4
small intestine
3
thyroid gland
3
trachea
2
ovary
1
pericardium
1
thymus
0
vagina
Project
162
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
137
hg19
40
GRCh38
annotation_type!
histone modifications
biosample_type!
tissue
BIOSAMPLE
TYPE
205 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
trophoblast cell
1
5
7
4
pancreatic acinar cell
6
3
3
3
1
+ See 22 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 1 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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