Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
94
candidate regulatory elements
50
chromatin state
49
target gene predictions
20
accessible chromatin
9
Fine-mapped variants
8
variant allelic effects
5
eQTL
5
gene expression
2
binding sites
histone modifications
Date released
138
September, 2022
56
February, 2021
10
May, 2020
9
March, 2020
7
January, 2020
6
February, 2020
6
June, 2020
3
May, 2021
2
January, 2022
2
May, 2019
2
November, 2019
1
March, 2024
Available data
173
bed bed3+
50
bed bed9
17
tsv
14
bigWig
4
bigBed bed9
Organism
242
Homo sapiens
Biosample type
235
tissue
6
cell line
1
primary cell
Organ
928
epithelium
646
kidney
443
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
268
pancreas
261
vasculature
251
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
143
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphatic vessel
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
vagina
4
nose
3
trachea
1
pericardium
Project
242
AMP
Genome assembly (visualization)
235
hg19
78
GRCh38
annotation_type!
histone modifications
files.file_type!
bam
organ_slims!
vagina
BIOSAMPLE
TYPE
242 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
Fine-mapped variants
variant allelic effects
eQTL
gene expression
binding sites
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
15
14
2
tibial nerve
6
4
3
3
3
2
2
2
tibial artery
3
3
2
3
3
2
2
1
gastrocnemius medialis
8
4
5
1
+ See 18 more…
cell line
GM23248
2
1
1
1
1
primary cell
fibroblast of arm
1
See all biosamples
Download