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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
225
candidate regulatory elements
127
target gene predictions
35
accessible chromatin
11
binding sites
9
Fine-mapped variants
9
variant allelic effects
6
eQTL
6
gene expression
histone modifications
1
chromatin state
Date released
232
September, 2022
122
February, 2021
12
June, 2020
10
March, 2020
9
November, 2021
8
May, 2020
7
January, 2020
7
May, 2021
6
February, 2020
4
October, 2022
3
April, 2020
3
January, 2022
2
March, 2024
2
November, 2019
1
August, 2017
1
February, 2024
Available data
408
bed bed3+
bed bed9
23
bigWig
18
tsv
4
bigBed bed9
Organism
429
Homo sapiens
Biosample type
323
tissue
75
cell line
31
primary cell
Organ
871
epithelium
569
kidney
394
connective tissue
352
brain
297
musculature of body
258
pancreas
237
lung
226
intestine
226
vasculature
203
heart
192
limb
177
embryo
171
blood vessel
168
bodily fluid
160
blood
157
skin of body
large intestine
128
liver
108
extraembryonic component
96
eye
95
stomach
80
adipose tissue
77
uterus
69
bone element
68
mammary gland
65
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
18
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
417
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
420
hg19
38
GRCh38
annotation_type!
histone modifications
files.file_type!
bed bed9
organ_slims!
large intestine
BIOSAMPLE
TYPE
429 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
Fine-mapped variants
variant allelic effects
eQTL
gene expression
chromatin state
tissue
lung
33
17
1
1
muscle of arm
33
16
1
1
muscle of leg
27
14
2
left lung
26
13
right lung
22
11
1
+ See 22 more…
cell line
A549
21
19
1
2
IMR-90
2
2
1
2
PC-9
2
2
1
1
WI38
5
1
GM23248
2
1
1
1
+ See 4 more…
primary cell
fibroblast of lung
6
4
2
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
type I pneumocyte
1
3
endothelial cell of artery
1
+ See 2 more…
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