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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
23
gene expression
21
accessible chromatin
20
target gene predictions
12
binding sites
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
chromatin state
3
variant allelic effects
1
caQTL
Date released
29
February, 2024
26
September, 2022
17
February, 2021
10
March, 2020
7
August, 2021
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
82
bed bed3+
27
tsv
21
bigWig
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
121
Homo sapiens
Biosample type
50
primary cell
48
tissue
17
cell line
6
in vitro differentiated cells
Organ
881
epithelium
569
kidney
connective tissue
352
brain
297
musculature of body
258
pancreas
237
lung
229
vasculature
226
intestine
205
heart
192
limb
177
embryo
171
blood vessel
168
bodily fluid
160
blood
157
skin of body
136
large intestine
130
liver
108
extraembryonic component
96
eye
95
stomach
80
adipose tissue
77
uterus
69
bone element
68
mammary gland
65
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
lymphatic vessel
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphoid tissue
18
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
117
AMP
4
ENCODE
Genome assembly (visualization)
91
hg19
38
GRCh38
2
hg18
annotation_type!
histone modifications
files.file_type!
bed bed9
organ_slims!
connective tissue
BIOSAMPLE
TYPE
121 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
binding sites
eQTL
differential activity
Fine-mapped variants
chromatin state
variant allelic effects
caQTL
primary cell
hepatocyte
2
13
8
3
1
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
13
1
4
10
1
7
1
2
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
3
3
1
HuH-7
1
1
1
1
HuH-7.5
1
1
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
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