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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1354target gene predictions
  • histone modifications
  • 942chromatin state
  • 817binding sites
  • 680gene expression
  • 385accessible chromatin
  • 189eQTL
  • 172differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2501September, 2022
  • 1736February, 2021
  • 340February, 2024
  • 289June, 2020
  • 286September, 2023
  • 262May, 2021
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 102May, 2020
  • 101October, 2022
  • 91August, 2021
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 33November, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5108bed bed3+
  • 3576tsv
  • 869bed bed9
  • bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9141Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1007ChIP-Atlas
  • 966ENCODE
  • 586DGA
  • 281KPMP
  • 274AMP
  • 266T1D
  • 1744DN
  • 152 T2DKP
  • 151GTEx
  • 144T2DKP
  • 104BLUEPRINT
  • 104T2D
  • 101eQTLCatalogue
  • 69CMDGA
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
Biosample type
  • 5114tissue
  • 1897primary cell
  • 1764cell line
  • 364in vitro differentiated cells
  • 4stem cell
Organ
  • 2874vasculature
  • 2834bodily fluid
  • 2824blood
  • 2819blood vessel
  • 2656vein
  • 754epithelium
  • 610kidney
  • 400connective tissue
  • 398brain
  • 357musculature of body
  • 298lung
  • 270intestine
  • 229heart
  • 228limb
  • 214pancreas
  • 202embryo
  • 186skin of body
  • 166large intestine
  • 138extraembryonic component
  • 126liver
  • 113stomach
  • 93adipose tissue
  • 82small intestine
  • 80uterus
  • 79mammary gland
  • 73bone element
  • 71prostate gland
  • 69eye
  • 68placenta
  • 67adrenal gland
  • 65artery
  • 61ureter
  • 59penis
  • 58lymph node
  • 48gonad
  • 47thymus
  • 43esophagus
  • 43spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 20lymphatic vessel
  • 19mouth
  • 13breast
  • 13bronchus
  • 12pituitary gland
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 9bone marrow
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 8703AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5489hg19
  • 1422GRCh38
  • 4hg18
annotation_type!
  • histone modifications
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

9145 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720211322
stomach402119131
brain29161811121
kidney29141517111
primary cell
common myeloid progenitor, CD34-positive271413
B cell171082
CD4-positive, alpha-beta memory T cell1499
CD14-positive monocyte8194
endothelial cell37292122
cell line
HeLa-S355531
A54921191821
H1-hESC1391281
K562723721
MCF-796531
in vitro differentiated cells
hematopoietic multipotent progenitor cell191010111
neural progenitor cell554710
adipocyte466113
embryonic stem cell1516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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