Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
15
accessible chromatin
9
binding sites
histone modifications
1
chromatin state
1
variant allelic effects
Date released
140
September, 2022
66
February, 2021
9
November, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
April, 2020
1
August, 2017
1
February, 2024
1
March, 2020
Available data
235
bed bed3+
70
bed bed9
9
bigWig
1
tsv
Organism
235
Homo sapiens
Biosample type
135
tissue
70
cell line
30
primary cell
Organ
526
epithelium
313
connective tissue
303
kidney
274
musculature of body
261
brain
235
lung
220
intestine
173
limb
169
heart
167
embryo
165
bodily fluid
158
vasculature
157
blood
152
skin of body
150
pancreas
132
large intestine
117
blood vessel
107
extraembryonic component
94
eye
92
stomach
89
liver
74
uterus
68
mammary gland
64
bone element
64
small intestine
57
adrenal gland
56
prostate gland
53
placenta
51
ureter
50
lymph node
49
penis
48
adipose tissue
41
artery
37
thymus
36
gonad
33
esophagus
29
spinal cord
26
spleen
18
testis
17
lymphoid tissue
17
ovary
17
thyroid gland
16
lymphatic vessel
16
vein
15
skeleton
14
nerve
13
bronchus
13
mouth
10
pituitary gland
9
bone marrow
9
breast
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
223
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
235
hg19
9
GRCh38
annotation_type!
histone modifications
files.file_type!
xls
organ_slims!
tongue
BIOSAMPLE
TYPE
235 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
chromatin state
variant allelic effects
tissue
lung
33
17
left lung
26
13
right lung
22
11
1
upper lobe of left lung
7
3
1
1
cell line
A549
21
19
1
2
IMR-90
2
2
1
2
PC-9
2
2
1
1
WI38
5
1
NCI-H226 cell
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
2
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
type I pneumocyte
1
3
endothelial cell of artery
1
+ See 1 more…
See all biosamples
Download