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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1593
candidate regulatory elements
1282
target gene predictions
histone modifications
881
accessible chromatin
811
binding sites
121
variant allelic effects
36
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1559
September, 2022
1504
February, 2021
314
November, 2021
287
February, 2024
277
June, 2020
165
May, 2021
135
May, 2020
100
October, 2022
66
January, 2020
56
January, 2021
43
March, 2020
41
November, 2022
39
May, 2024
36
August, 2021
31
February, 2023
30
August, 2017
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4759
bed bed3+
896
tsv
812
bed bed9
535
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4713
Homo sapiens
Biosample type
1583
tissue
1514
cell line
1402
primary cell
254
in vitro differentiated cells
4
stem cell
Organ
529
epithelium
313
connective tissue
303
kidney
274
musculature of body
261
brain
235
lung
intestine
173
limb
169
heart
167
embryo
165
bodily fluid
158
vasculature
157
blood
153
pancreas
152
skin of body
132
large intestine
117
blood vessel
107
extraembryonic component
94
eye
92
stomach
89
liver
74
uterus
68
mammary gland
64
bone element
64
small intestine
57
adrenal gland
56
prostate gland
53
placenta
51
ureter
50
lymph node
49
penis
48
adipose tissue
41
artery
37
thymus
36
gonad
33
esophagus
29
spinal cord
26
spleen
18
testis
17
lymphoid tissue
17
ovary
17
thyroid gland
16
lymphatic vessel
16
vein
15
skeleton
14
nerve
13
bronchus
13
mouth
10
pituitary gland
9
bone marrow
9
breast
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
4365
AMP
314
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4751
hg19
713
GRCh38
1
hg18
annotation_type!
histone modifications
organ_slims!
intestine
tongue
BIOSAMPLE
TYPE
4759 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
2
stomach
40
21
3
kidney
29
14
10
1
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 158 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
HFFc6
19
+ See 631 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
15
2
2
2
1
fibroblast
3
4
16
1
6
CD14-positive monocyte
8
19
+ See 303 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
10
adipocyte
4
6
4
1
4
mesenchymal stem cell
3
3
1
1
embryonic stem cell
1
5
1
+ See 79 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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